file: Supplemental Table S6.2.xlsx
format: excel
meta:
  description: "Summary of sequencing model analysis for genome-wide significant variants\
    \ associated with SCZ and Alzheimer\u2019s disease. For each variant, a proximal\
    \ gene is listed, and the predicted impact on chromatin accessibility is quantified\
    \ using contribution scores across MAGMA-significant cell types. The Delta of\
    \ Chromatin Accessibility is reported (predicted accessibility of the reference\
    \ sequence minus accessibility of the mutated sequence)."
  summary: Effects of genome-wide significant variants on predicted chromatin accessibility.
    - Alzheimer_SNPs
  labels:
    assay: 10x_Multiome
    dataset: johansen2025Crossspecies
    vendor: 10x_Genomics
    sequencing_platform: Illumina
    brain_region: basal ganglia
parameters:
  sheet_name: Alzheimer_SNPs
type: data_frame