type: position_score

table:
  filename: SST_ATAC_RPKM.bw
  chrom:
    index: 0
  pos_begin:
    index: 1
  pos_end:
    index: 2

# score values
scores:
  - id: zemke2023Conserved_human_m1_SST_atac_rpkm
    type: float
    desc: "Pseudo-bulk RPKM atac in human_m1 for SST cell type"
    index: 3
    histogram:
      type: number
      number_of_bins: 100
      y_log_scale: True
      x_log_scale: True
      x_min_log: 0.00001



meta:
  summary: "Pseudo-bulk atac track in human_m1 for SST cell type"

  description: |

    [Zemke, et al, Conserved and divergent gene regulatory programs of the
    mammalian neocortex, Nature 2023.](https://www.nature.com/articles/s41586-023-06819-6)

    Downloaded from:

    [https://epigenome.wustl.edu/renlab/human\_m1\_atac/SST\_ATAC\_RPKM.bw](https://epigenome.wustl.edu/renlab/human_m1_atac/SST_ATAC_RPKM.bw)
  labels:
    species: human
    cell_type: SST
    assay: atac
    brain_region: m1