type: position_score

table:
  filename: CLA.CHN-both.bedgraph.gz
  format: tabix

  header_mode: none
  zero_based: True

  chrom:
    index: 0
  pos_begin:
    index: 1
  pos_end:
    index: 2

scores:
  - id: zemke2023Conserved_Marmoset_CLA_chn_mc
    index: 3
    type: float


meta:
  summary: "Pseudo-bulk wc track in Marmoset M1 region for CLA cell type"

  description: |

    [Zemke, et al, Conserved and divergent gene regulatory programs of the
    mammalian neocortex, Nature 2023.](https://www.nature.com/articles/s41586-023-06819-6)

    Downloaded from:

    [https://epigenome.wustl.edu/renlab/mC/Marmoset/CLA.CHN-both.bedgraph.gz](https://epigenome.wustl.edu/renlab/mC/Marmoset/CLA.CHN-both.bedgraph.gz)
  labels:
    species: marmoset
    cell_type: CLA
    assay: snm3C-seq
    brain_region: m1
    dataset: zemke2023Conserved
    reference_genome: reference/Marmoset/genome/cj1700_1.1
    measure: CHN
    vendor: UCSD Single-cell Epigenomics Platform
    resolution: pseudo_bulk_cell_type
    modalities: DNA_methylation
    processing_level: processed
    data_types: methylation_signal