Resource
| Id | reference/Marmoset/genome/calJac240_pri |
|---|---|
| Type | genome |
| Version | 0 |
| Summary |
Marmoset (Callithrix jacchus) reference genome
|
| Description |
Genome assembly of the common marmoset (Callithrix jacchus), calJac240_pri (GCF_049354715.1), in FASTA format Downloaded from: https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/049/354/715/GCF_049354715.1_calJac240_pri/GCF_049354715.1_calJac240_pri_genomic.fna.gz Download date: 8/19/2026 |
| Labels |
Chromosomes (25):
| Chrom | Length | A | T | C | G | N |
|---|---|---|---|---|---|---|
| Global | 2,933,425,964 | 29.56% | 29.60% | 20.40% | 20.43% | 0.01% |
| NC_133502.1 | 220,781,134 | 29.32% | 29.46% | 20.59% | 20.62% | 0.00% |
| NC_133503.1 | 206,717,255 | 29.90% | 29.88% | 20.11% | 20.11% | 0.00% |
| NC_133504.1 | 193,242,953 | 30.89% | 30.81% | 19.18% | 19.12% | 0.00% |
| NC_133505.1 | 178,191,855 | 30.13% | 30.11% | 19.89% | 19.87% | 0.00% |
| NC_133506.1 | 167,432,195 | 28.04% | 28.16% | 21.88% | 21.92% | 0.00% |
| NC_133507.1 | 163,750,270 | 29.95% | 29.93% | 20.07% | 20.04% | 0.00% |
| NC_133508.1 | 160,158,162 | 29.02% | 28.98% | 21.00% | 21.00% | 0.00% |
| NC_133509.1 | 141,933,726 | 29.31% | 29.46% | 20.65% | 20.58% | 0.00% |
| NC_133510.1 | 137,132,494 | 29.55% | 29.60% | 20.42% | 20.42% | 0.00% |
| NC_133511.1 | 133,459,911 | 29.25% | 29.30% | 20.70% | 20.76% | 0.00% |
| NC_133512.1 | 129,916,798 | 30.30% | 30.20% | 19.76% | 19.74% | 0.00% |
| NC_133513.1 | 127,981,735 | 28.66% | 28.71% | 21.31% | 21.32% | 0.00% |
| NC_133514.1 | 124,728,607 | 29.92% | 29.90% | 20.12% | 20.06% | 0.00% |
| NC_133515.1 | 114,986,732 | 29.51% | 29.47% | 20.50% | 20.53% | 0.00% |
| NC_133516.1 | 104,736,960 | 29.43% | 29.34% | 20.59% | 20.63% | 0.00% |
| NC_133517.1 | 100,665,691 | 30.15% | 30.22% | 19.77% | 19.86% | 0.00% |
| NC_133518.1 | 83,601,742 | 30.35% | 30.17% | 19.68% | 19.81% | 0.00% |
| NC_133519.1 | 56,798,337 | 29.51% | 29.55% | 20.22% | 20.54% | 0.18% |
| NC_133520.1 | 57,622,253 | 29.09% | 29.57% | 20.45% | 20.90% | 0.00% |
| NC_133521.1 | 55,874,591 | 28.42% | 29.58% | 20.55% | 21.45% | 0.00% |
| NC_133522.1 | 54,541,873 | 30.45% | 30.37% | 19.57% | 19.61% | 0.00% |
| NC_133523.1 | 51,666,166 | 25.53% | 25.52% | 24.35% | 24.47% | 0.12% |
| NC_133524.1 | 151,627,724 | 30.29% | 30.26% | 19.71% | 19.74% | 0.00% |
| NC_133525.1 | 15,860,301 | 29.53% | 28.88% | 21.32% | 20.27% | 0.00% |
| NC_025586.1 | 16,499 | 32.75% | 26.95% | 26.91% | 13.39% | 0.00% |
Bi-Nucleotide distribution:
| A | T | C | G | N | |
|---|---|---|---|---|---|
| A | 9.78% | 7.70% | 5.07% | 7.01% | 0.00% |
| T | 6.53% | 9.80% | 5.97% | 7.30% | 0.00% |
| C | 7.28% | 7.01% | 5.11% | 1.01% | 0.00% |
| G | 5.97% | 5.09% | 4.25% | 5.12% | 0.00% |
| N | 0.00% | 0.00% | 0.00% | 0.00% | 0.01% |
Files
| Filename | Size | md5 |
|---|---|---|
| GCF_049354715.1_calJac240_pri_genomic.fna.gz | 887.9 MB | 898ce54c94121d120bd11ab0eac38415 |
| GCF_049354715.1_calJac240_pri_genomic.fna.gz.fai | 952.0 B | 527100bdfb91884cf667e3a9bf0ed4d5 |
| GCF_049354715.1_calJac240_pri_genomic.fna.gz.gzi | 711.73 KB | 770127ae91518a1141964a1940219084 |
| genomic_resource.yaml | 471.0 B | ece15221dff7b046bafe137fb1b95737 |
| statistics/ |