Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/03a248f86e5097210b0343b1c22edb588a592d41content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 03a248f86e5097210b0343b1c22edb588a592d41
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GAGGTTAAGTCAATTG-2305_A01, CGATTTGCAGAAACGT-2305_A01, TTTAAGCCACAATGCC-2305_A01, CTAAGGTTCACAGCGC-2305_A01, TTATTGCTCCAGGGAG-2305_A01 (top 5 of 462 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
03a248f86e5097210b0343b1c22edb588a592d41.gz 286.65 MB f6f4ca0665f0bbe821ce0bc3e8c9af80
03a248f86e5097210b0343b1c22edb588a592d41.gz.tbi 575.75 KB 7f7f13fd6af19137180594de1de99baf
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 0d9b49d2347e16b43d7b1e609588c136
statistics/