Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/0575f26cb1e1e646c422658518fe6927eac5c31acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0575f26cb1e1e646c422658518fe6927eac5c31a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GACCTTTGTAGGTTAT-2526_A01, ACCTAAGGTTTGCTGT-2526_A01, CTAAGTCAGGAGGCAT-2526_A01, TCTCACCAGGTTTACA-2526_A01, AGAATCGAGGAGGGTT-2526_A01 (top 5 of 3329 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0575f26cb1e1e646c422658518fe6927eac5c31a.gz 1.76 GB 302ba797ab711c847f58257d32316186
0575f26cb1e1e646c422658518fe6927eac5c31a.gz.tbi 1014.24 KB b5068d89888eb752832243079e3d424b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 240ce2999a1420ad0055047dc0af2d38
statistics/