Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/06043bb557ca604218ca7f91581e83d93a4625e7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 06043bb557ca604218ca7f91581e83d93a4625e7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGCGTGCTCCGGAACC-2372_C04, GTAGCTGTCTGGCAAT-2372_C04, ACGCCACAGACAACAG-2372_C04, GCAATCTAGCTGGCTA-2372_C04, GGATGGCCATTGTCAG-2372_C04 (top 5 of 4763 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
06043bb557ca604218ca7f91581e83d93a4625e7.gz 1.77 GB c916d1b36a9a60d2f231c9356642b5be
06043bb557ca604218ca7f91581e83d93a4625e7.gz.tbi 1005.64 KB 76132029429e2a710baad076c0c2310c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB c434cee76b620460cccaa0fd3d54bfbf
statistics/