Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/0704a0c4dfc17e671731ca261bd8e38d613155a3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0704a0c4dfc17e671731ca261bd8e38d613155a3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCCGGAATCACCAATA-1279_B07, GTTCCTTCAGTTTGTG-1279_B07, GAGGACTAGGCTACTG-1279_B07, TTTGTCTAGCCTGGTA-1279_B07, AAGCCTGTCGTAACGT-1279_B07 (top 5 of 2118 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0704a0c4dfc17e671731ca261bd8e38d613155a3.gz 749.79 MB 7167423e2260ae7de7e24187e1593258
0704a0c4dfc17e671731ca261bd8e38d613155a3.gz.tbi 705.68 KB 88c5cc3274c5268e3fd0fbb9dafd03af
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7b350027877666634bd9a99b657f3f07
statistics/