Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/0ad387162a225d22193a66dd2f692dfae34ffd7dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0ad387162a225d22193a66dd2f692dfae34ffd7d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTCTCATCGGTTTCC-2511_B02, TTTGTCCCATACCCGG-2511_B02, TGGTCAAGTTTGTGGA-2511_B02, GGTGCTTCAATACTGT-2511_B02, CGATTCCTCTTGAGCG-2511_B02 (top 5 of 5376 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0ad387162a225d22193a66dd2f692dfae34ffd7d.gz 2.27 GB 72ed598f18781a9470155559f692983a
0ad387162a225d22193a66dd2f692dfae34ffd7d.gz.tbi 1.15 MB 2ffed67275d8dab498adbb02867199ed
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3edd3a7becb69b16c8bb87413bfb965d
statistics/