Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/0bde255f925875e8c2710673628ac8259c4e44eccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 0bde255f925875e8c2710673628ac8259c4e44ec
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TACGTACAGGTTAGAG-2368_B02, TAGCGGCTCGATTTAG-2368_B02, CTCCGGACAGCAAATA-2368_B02, ATCTATGAGTAAGTCC-2368_B02, CCACTTGGTTGGTTAG-2368_B02 (top 5 of 4742 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
0bde255f925875e8c2710673628ac8259c4e44ec.gz 2.35 GB 940234a419ac6ac76c86b60736f1224b
0bde255f925875e8c2710673628ac8259c4e44ec.gz.tbi 1.15 MB 450c4081b2c9a43f5fd2c8b12d2e25b2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 6eab30c6b2316d456b0dda24d1b2bed7
statistics/