Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/13d2c162820f6a063af8d4c3f3acac3f82cfefdfcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 13d2c162820f6a063af8d4c3f3acac3f82cfefdf
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTGGAGCAGCAACAG-2235_B03, CAGGGTGAGTATCGCG-2235_B03, GGGTGTTGTATTCGTC-2235_B03, GTAGGTGCAGCCTAAC-2235_B03, CATAGTCAGCAAGATG-2235_B03 (top 5 of 6603 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
13d2c162820f6a063af8d4c3f3acac3f82cfefdf.gz 2.01 GB adb5e404580700d101f5d19c76e83564
13d2c162820f6a063af8d4c3f3acac3f82cfefdf.gz.tbi 1.06 MB 1411aea1ada0faf1ead1d6d978de40bd
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 962fee18fd74514eb0c318ba352ac0ec
statistics/