Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/145979574e93695f7931219348f8b06d0f5cd6b4content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 145979574e93695f7931219348f8b06d0f5cd6b4
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTGCAAGCATAGACCC-2269_1_E06, CTAGCTGAGCTTTGGG-2269_1_E06, GGCTATGTCTTGTCTG-2269_1_E06, CAGGACACAAGTAAGC-2269_1_E06, GCTGCAATCCTAGTTT-2269_1_E06 (top 5 of 1093 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
145979574e93695f7931219348f8b06d0f5cd6b4.gz 483.26 MB c4ad762d21ca9a560b24d6aa5995ef28
145979574e93695f7931219348f8b06d0f5cd6b4.gz.tbi 633.27 KB d9792dc050991bbca1dcfdc906d6d6a8
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 5889646e14fd0c5a31a7a993eb1537d5
statistics/