Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/181c2031341a74bdcb4f29ff2d79b04d9759187econtent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 181c2031341a74bdcb4f29ff2d79b04d9759187e
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTGCAAGGTGGATTAT-2305_F01, AATTGCTCAATGAGGT-2305_F01, CTATTCAGTTTACTTG-2305_F01, AGAGGATGTGTAATAC-2305_F01, TTAGACTCAAGGTCCT-2305_F01 (top 5 of 3832 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
181c2031341a74bdcb4f29ff2d79b04d9759187e.gz 2.32 GB 3522f0e7a463a928db97e96db58860bb
181c2031341a74bdcb4f29ff2d79b04d9759187e.gz.tbi 1.17 MB 13a50498e6db7f4e9f5338d8d1aa9af2
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 87051470e265913b110b2f79044a701d
statistics/