Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/1bea11cc30d98019a065e7756045183e0001749acontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 1bea11cc30d98019a065e7756045183e0001749a
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTCCACGGTTGAAGCC-2253_B01, TGTATCGCAGGCAAGC-2253_B01, GCTAGTGTCGTGCTTC-2253_B01, TGTCCTGGTTGTAAAC-2253_B01, AAACAGCCAATAACGA-2253_B01 (top 5 of 4121 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
1bea11cc30d98019a065e7756045183e0001749a.gz 2.78 GB d4c1b4a6369798698350c3923872bf17
1bea11cc30d98019a065e7756045183e0001749a.gz.tbi 1.27 MB bc5076a0a7b6fbcfc2ddf13640a2fead
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 27c0bdd3f48926e9c426281fc827bc95
statistics/