Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/22ef06890ad0779f6fe8a4260284344f37834a95content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 22ef06890ad0779f6fe8a4260284344f37834a95
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATGTCCAGCCACAAT-2275_E02, AAAGGACGTGTGCACG-2275_E02, CGCTTACTCTTAGGGT-2275_E02, TTACCGTGTGAATCGC-2275_E02, GTAGGTGCAGCAACCT-2275_E02 (top 5 of 6291 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
22ef06890ad0779f6fe8a4260284344f37834a95.gz 3.12 GB 48029b778bf95d15f2d10fe953d2a9c4
22ef06890ad0779f6fe8a4260284344f37834a95.gz.tbi 1.36 MB ff96184648a8458ecce5a4c8ac05790c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 8800fed47fd3454b462b4d6392f0f8b5
statistics/