Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/27e432319f3feb82561cfcef5be4f020440787c6content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 27e432319f3feb82561cfcef5be4f020440787c6
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATCTTGAGAAGCTAG-2517_B05, GAAGCTAAGGTGAAAT-2517_B05, ATAAGTCGTGGATTCA-2517_B05, CTGATCACACATTAAC-2517_B05, ATGGTCTAGGTTTGAC-2517_B05 (top 5 of 2422 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
27e432319f3feb82561cfcef5be4f020440787c6.gz 1.31 GB 814129539892a721fad5c940157deb14
27e432319f3feb82561cfcef5be4f020440787c6.gz.tbi 917.16 KB f60f5e0b0f142b64a547259a05267e43
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 68401ec338d60f589baeba5fad48289f
statistics/