Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/307f6497935cd43d556b3576943746f7d20d4daccontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 307f6497935cd43d556b3576943746f7d20d4dac
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CATCAATCAGGCAAGC-1959_A02, GACCGTTCACTTGTTC-1959_A02, AAGCGCTGTGCACGCA-1959_A02, CTGCTACTCTTAGCGG-1959_A02, GCCTTTGGTGTTGTAG-1959_A02 (top 5 of 5642 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
307f6497935cd43d556b3576943746f7d20d4dac.gz 2.0 GB dd45c323c3ed178b69bb00f86ebc04f6
307f6497935cd43d556b3576943746f7d20d4dac.gz.tbi 1.06 MB e8d669b147807afa2364f76278291452
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3372a966d4dc6430e66d5551c27407a7
statistics/