Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/3126961940d5ca2fbcac2f6b38cb091d41aee6b5content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 3126961940d5ca2fbcac2f6b38cb091d41aee6b5
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTGAGGCGTTACAAAC-980_C02, CCGCTAGCAGAGGGAG-980_C02, GCTATTGCAAACCTAT-980_C02, GCGATTTAGGTTAGAG-980_C02, CTCCGGACAGGAACTG-980_C02 (top 5 of 4516 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
3126961940d5ca2fbcac2f6b38cb091d41aee6b5.gz 1.99 GB ffdb4a51e4898b4557eee4f85886ade5
3126961940d5ca2fbcac2f6b38cb091d41aee6b5.gz.tbi 1.05 MB e78581a19e2ba42483e676ebacebc642
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 8ac95b58a729439251a5ad1cb213a422
statistics/