Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/36c1b6ed8d97cac1675605754b7081748ac90487content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 36c1b6ed8d97cac1675605754b7081748ac90487
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACGGGAAGTGCTCACC-2305_D01, AATCTTGAGTAGCTTA-2305_D01, ATAGCATGTTGCGCGA-2305_D01, TTCTTAGGTTGGATAT-2305_D01, CAGGTGGAGGTCCTGA-2305_D01 (top 5 of 4633 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
36c1b6ed8d97cac1675605754b7081748ac90487.gz 2.19 GB 5723b84e66e6388c1baf2f397540c6a6
36c1b6ed8d97cac1675605754b7081748ac90487.gz.tbi 1.12 MB 94a9dbdc48cbb380359c515def58bb75
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 46966af6529cbefc187f3152ad666e7f
statistics/