Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/37b5d076acd9bde5271749560a5702efde30ae24content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 37b5d076acd9bde5271749560a5702efde30ae24
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACGTTACAGGCTGTGC-2016_B03, GCTGTGCAGGTCGAGG-2016_B03, CCAGGAACATCCAGGT-2016_B03, TAGCCTTGTTGAGCCG-2016_B03, CAACAGGCAAGCTTAT-2016_B03 (top 5 of 5755 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
37b5d076acd9bde5271749560a5702efde30ae24.gz 2.63 GB 0c043248b09fa805f0c18dff47ea2ace
37b5d076acd9bde5271749560a5702efde30ae24.gz.tbi 1.23 MB befff0c3628a02011784aa1fb26ea1b5
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2fb99eedfe56726aef1a7b534301938e
statistics/