Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/38ad384f2bffb2ac1c8d631e3cdef1bef8418143content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 38ad384f2bffb2ac1c8d631e3cdef1bef8418143
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CCTACTGGTTGCGGAT-2414_A01, GGCGTTATCTTAGGGT-2414_A01, TGGACTAGTTACTTCA-2414_A01, CTTAAGATCGGCTATG-2414_A01, TTAGGATGTTAATGCG-2414_A01 (top 5 of 2737 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
38ad384f2bffb2ac1c8d631e3cdef1bef8418143.gz 1.14 GB 0b8ea9a1cbf94697a8c955d8f58c5746
38ad384f2bffb2ac1c8d631e3cdef1bef8418143.gz.tbi 820.19 KB f6cc0a30ebc7be5f7116069f481eccdb
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 45c16dd04e058db3a00cf47c6256caf4
statistics/