Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/3ec148dd4520ccd99247689996157b2b85622d34content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 3ec148dd4520ccd99247689996157b2b85622d34
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GATTTGCAGGCGAAAC-2368_A02, AGGTTGCGTCATTGTC-2368_A02, CAGGTGGAGTAATCCA-2368_A02, GACACCGGTCATTGAG-2368_A02, AGGACTAAGTAAGTCC-2368_A02 (top 5 of 3882 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
3ec148dd4520ccd99247689996157b2b85622d34.gz 1.35 GB f69b66c2890bfde48312fa3fcf5509a9
3ec148dd4520ccd99247689996157b2b85622d34.gz.tbi 886.04 KB 68aed4ff4c1b6c7c3fa23fbaa5466187
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 8d1e0ddd69b2a7711abdc23380362dcc
statistics/