Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/43083f62ef1834bd80dd0a2710944da000b8abe9content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 43083f62ef1834bd80dd0a2710944da000b8abe9
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AAGACATAGGATTGAG-2263_B01, AGGGCTACATGATTGT-2263_B01, GATGAGGGTGTGAGAG-2263_B01, TCTATGTTCTAGCGAT-2263_B01, ATATAGGCAATTAGCT-2263_B01 (top 5 of 5927 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
43083f62ef1834bd80dd0a2710944da000b8abe9.gz 2.96 GB 2c1892aaf5f1eae6d0154ca2088060f6
43083f62ef1834bd80dd0a2710944da000b8abe9.gz.tbi 1.31 MB 55b1d941fd9efffe68872a0fc8373de3
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB f2e1fd70f1bb3286d9c22d99649efe7a
statistics/