Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/445a4a879613ae396bfecfb7fd8832b9c4d014a0content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 445a4a879613ae396bfecfb7fd8832b9c4d014a0
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGCTAGCCAGGCAAGC-988_C05, TTGCAGCCAAACCCTA-988_C05, CCCAAACCACTCAACA-988_C05, AGAGAGGAGCTCGCTT-988_C05, GGCTAGTGTGACATGC-988_C05 (top 5 of 2887 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
445a4a879613ae396bfecfb7fd8832b9c4d014a0.gz 804.03 MB f2b52c3bf2900b8ae406400f161319f1
445a4a879613ae396bfecfb7fd8832b9c4d014a0.gz.tbi 713.36 KB 883c9c6ee0984f31dd4cb062d67864e8
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 9584d5df71755e042529d22f22cfabf2
statistics/