Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/488a55e190504b0a3f41fa3c77e8539ebf9c97b6content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 488a55e190504b0a3f41fa3c77e8539ebf9c97b6
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGAGTGAAGCTTAGTA-2551_1_F01, CTGGCTAAGTTCCCAC-2551_1_F01, ACAAAGGTCGTTAGTA-2551_1_F01, TGGTCAAGTTGTAAAC-2551_1_F01, GGTGTTGTCAGGGCCT-2551_1_F01 (top 5 of 2235 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
488a55e190504b0a3f41fa3c77e8539ebf9c97b6.gz 731.44 MB 9c36bb5fed95dc54de6f37e5b6f8d2db
488a55e190504b0a3f41fa3c77e8539ebf9c97b6.gz.tbi 702.71 KB 388c303ab68525987f28ec1481ba7ab5
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a8d917cd6ce69069352562451a252ef7
statistics/