Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/5875a6b47d77ef336850b7222cbdb0d2ac450f83content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5875a6b47d77ef336850b7222cbdb0d2ac450f83
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GCCTGTGCAGCCAGTT-1233_A02, AAGTTACGTGTTTGCT-1233_A02, ATTGGCTAGTTATTCC-1233_A02, AATCCCTGTTGGTTCT-1233_A02, CGTAATGGTATTCGTC-1233_A02 (top 5 of 265 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5875a6b47d77ef336850b7222cbdb0d2ac450f83.gz 35.7 MB 3b6009fe897ad6b5035bcb7ad0e74f4f
5875a6b47d77ef336850b7222cbdb0d2ac450f83.gz.tbi 940.67 KB ef857bac42f8c812c2fef870f137c718
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 5b2ae91df28ae7991c909b5cba43f27b
statistics/