Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/5970e5a0d94e4832c611c2d03625eb1c7a206153content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5970e5a0d94e4832c611c2d03625eb1c7a206153
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTCTCATCGCAAACT-2263_D01, AGTAACGAGTAAGTGG-2263_D01, GCACATTAGGCACAGG-2263_D01, CAAAGGATCAAACTCA-2263_D01, ACTTGTAAGGGACTAA-2263_D01 (top 5 of 2227 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5970e5a0d94e4832c611c2d03625eb1c7a206153.gz 1.18 GB 4c886b56425160f9aa8931b91d3d38ef
5970e5a0d94e4832c611c2d03625eb1c7a206153.gz.tbi 835.67 KB 629df01ca78aa9b2920e7305df29ed60
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB a5f57b58be3b43814bd4f289aa87a13c
statistics/