Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/5a8e588147c0131ac4ce05e5c60022a277062572content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5a8e588147c0131ac4ce05e5c60022a277062572
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTCTAAGCACCTCACC-2459_C05, GAGCTTAGTGTTTGAG-2459_C05, CGACCTGCATTATGGT-2459_C05, GGTGAGGTCACAGACT-2459_C05, GGTCTTTGTTAGAGGG-2459_C05 (top 5 of 5393 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5a8e588147c0131ac4ce05e5c60022a277062572.gz 2.28 GB a1523c2405dbd45a4938796c5b4883a1
5a8e588147c0131ac4ce05e5c60022a277062572.gz.tbi 1.15 MB bdc5cb7c6bf3e114db2fa9afbc416b9d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3234cba188d364ed84f1792f82018174
statistics/