Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/5c2ad0c0b8a218360c36908d422ed46a85ba1537content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5c2ad0c0b8a218360c36908d422ed46a85ba1537
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTGTTGCACCTCACC-2317_C05, GGCTCAATCCTTGCGT-2317_C05, GCCTTAACAAAGGCCA-2317_C05, TAGCAGGCAAGCCAGA-2317_C05, ACCTACCTCTACCTGC-2317_C05 (top 5 of 5916 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5c2ad0c0b8a218360c36908d422ed46a85ba1537.gz 2.5 GB b51def712fb893713579e330b4db03e4
5c2ad0c0b8a218360c36908d422ed46a85ba1537.gz.tbi 1.21 MB 86790386c73e007c1e51ec8139216416
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB cdffc8eed0cf987f4ad0f4d3c5337c35
statistics/