Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/5d3a24ec949440de4152c0d8fdd30f03db6e9289content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 5d3a24ec949440de4152c0d8fdd30f03db6e9289
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AGCGCCTAGACACTTA-2346_C06, GGATTGCGTGTTAAAC-2346_C06, CGATTTGCAGTACCGT-2346_C06, ATCCAACAGTAGCGGG-2346_C06, AAGTTAGCAAGGAATC-2346_C06 (top 5 of 5186 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
5d3a24ec949440de4152c0d8fdd30f03db6e9289.gz 1.91 GB 48d709120360eb248e83c939c2610959
5d3a24ec949440de4152c0d8fdd30f03db6e9289.gz.tbi 1.03 MB 0913add589d3ba3397e438bd11b5a7cc
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 7e776033250e4356c0836595997d28d4
statistics/