Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/6127719df1cbc42f0004604734d2d4ffea81b061content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 6127719df1cbc42f0004604734d2d4ffea81b061
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TCGACAAGTGATCAGC-925_F03, AATAGCTGTTGCTGGG-925_F03, GTCGAAGCAGAACCGA-925_F03, TTAGACTCATCTAGCA-925_F03, AAGCTTGGTGTTTGTC-925_F03 (top 5 of 1776 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
6127719df1cbc42f0004604734d2d4ffea81b061.gz 279.57 MB 4212002a99b8a4ad91c1a53599799423
6127719df1cbc42f0004604734d2d4ffea81b061.gz.tbi 573.58 KB c101951a582c298a994998cac7b1af23
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 5d0773965fd3f39e7db5237b45ad5857
statistics/