Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/65dd629a0037be17954a4fe363a62a5de2075478content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 65dd629a0037be17954a4fe363a62a5de2075478
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TAACAAGCAATCGCAC-2289_D04, GAGGAGGCAGTTAGCC-2289_D04, TCAAGGAAGTTCCCGT-2289_D04, ATTACTGAGCACTTGG-2289_D04, AGACCCGGTTACTTCA-2289_D04 (top 5 of 4415 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
65dd629a0037be17954a4fe363a62a5de2075478.gz 2.01 GB a3418b8c2cc339467e7659fda9f0e56c
65dd629a0037be17954a4fe363a62a5de2075478.gz.tbi 1.05 MB 6c649ca22985b33382f9777f58d11446
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 0f21e5947866804e9cff24629d7b3746
statistics/