Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/693e02ac3156180a23875b14278b0f334fc9917dcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 693e02ac3156180a23875b14278b0f334fc9917d
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCAAACTCCGTAAAC-2271_B08, ATTACCCGTGAGCACT-2271_B08, AATCTCAAGCTTGCTC-2271_B08, GATGAGGGTGTGAGAG-2271_B08, AGCTTTAAGCTTTGGG-2271_B08 (top 5 of 3712 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
693e02ac3156180a23875b14278b0f334fc9917d.gz 2.02 GB 98bb1bb68530707daf21d08cd8f304a3
693e02ac3156180a23875b14278b0f334fc9917d.gz.tbi 1.06 MB 40fac97d8f3164253d789845a01c96d6
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 998228ae2b05538396df2392ae98f3ce
statistics/