Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/6da44dec4b26584c81cdbf29799d97d85a339167content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 6da44dec4b26584c81cdbf29799d97d85a339167
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTTAAGCCACCACAAC-2253_C01, GCCTTAACACAAAGGT-2253_C01, CATGCGGGTGCGCGTA-2253_C01, GATTGGTTCGTTCACC-2253_C01, TTGTTGCGTAAGGTCC-2253_C01 (top 5 of 4536 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
6da44dec4b26584c81cdbf29799d97d85a339167.gz 2.84 GB 0c88d09bfbf13973ffdfdc8580c801c5
6da44dec4b26584c81cdbf29799d97d85a339167.gz.tbi 1.28 MB 8d98567abb053f85c5b4090eb5710f6d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 19d1a7d9946ac511773d239fde356d92
statistics/