Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/6fc1e3314264c5e533c729a09c4166f1218cee99content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 6fc1e3314264c5e533c729a09c4166f1218cee99
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGCAATAGTTGGCCA-2330_A09, CACATACAGGCCTGGT-2330_A09, CGAAGAATCTTTGAGA-2330_A09, CAGGTTTAGCGATAGA-2330_A09, AACCCGCAGCGATAAG-2330_A09 (top 5 of 3557 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
6fc1e3314264c5e533c729a09c4166f1218cee99.gz 1.74 GB aa1a046f28ac6c9db3b87875f65361c4
6fc1e3314264c5e533c729a09c4166f1218cee99.gz.tbi 1020.0 KB 1c0093db287990c2db600cbb8e2a7396
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 56f6b93ba9d80ce21964b707377ba284
statistics/