Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/703596d63d016c2ee6f8f4aecfa1d64e58b1eedbcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 703596d63d016c2ee6f8f4aecfa1d64e58b1eedb
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CAAGTTATCGAGCTAT-2530_C02, GGCTATTAGTTTGCGG-2530_C02, CGACCTGCACTAGCGT-2530_C02, CCCAATTGTGATGGCT-2530_C02, GGGCAATAGCGCTCAA-2530_C02 (top 5 of 3066 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
703596d63d016c2ee6f8f4aecfa1d64e58b1eedb.gz 1.84 GB af1a940882723d79a45407bb18ae1a1e
703596d63d016c2ee6f8f4aecfa1d64e58b1eedb.gz.tbi 1.03 MB 6620f466f5a4e934287105f0e62f346c
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 95ee4650fca1d3bd86b357ba2e2491fd
statistics/