Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/730701191cdf5defff05b5ca98941d244a8fda91content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 730701191cdf5defff05b5ca98941d244a8fda91
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TATCACAAGGCTACAT-2440_1_D02, CTTTAGGCAAACTAAG-2440_1_D02, GTGATCAGTTACAAAC-2440_1_D02, ACGAACAAGGTCCGTA-2440_1_D02, CACTTTGTCCTGAATA-2440_1_D02 (top 5 of 2135 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
730701191cdf5defff05b5ca98941d244a8fda91.gz 724.15 MB 2bf0f69965aa333d83c3fff300204da4
730701191cdf5defff05b5ca98941d244a8fda91.gz.tbi 697.46 KB 71579588f187e14d46b65913e0e8fde8
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 49874e42305a6965d297b1cffd9ae84b
statistics/