Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/756c69e73f483cf54d2643674861c1a747512adbcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 756c69e73f483cf54d2643674861c1a747512adb
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GTTAGGCGTCCTAATC-1042_C06, TGCATCCTCGATTTAG-1042_C06, CCTCCTGAGGTCCACA-1042_C06, CTTAGTTTCCATAATG-1042_C06, TGGACGGAGTAACGAG-1042_C06 (top 5 of 5116 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
756c69e73f483cf54d2643674861c1a747512adb.gz 2.81 GB c5d6eddcea418e9e882001bd5ea912a7
756c69e73f483cf54d2643674861c1a747512adb.gz.tbi 1.26 MB dfed04e0ca052b93120d5c49fc9b2b4f
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 64d6dd46aa383dddc850872b3d7ecdb8
statistics/