Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/75c184e7dae7ea6680f6679d690936f148d371f7content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 75c184e7dae7ea6680f6679d690936f148d371f7
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TATCGAGGTGTTTCAC-2229_C06, TATAACCCATGCTATG-2229_C06, CAATGCCCACCTGTAA-2229_C06, CACCGGTAGCTGTACG-2229_C06, GTTTACCGTACCGAAC-2229_C06 (top 5 of 6209 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
75c184e7dae7ea6680f6679d690936f148d371f7.gz 3.52 GB b7862f4e1b8c8be7d343a470fe7f8e86
75c184e7dae7ea6680f6679d690936f148d371f7.gz.tbi 1.45 MB 49b19ae3de7ebcb1b1bd907d214ae86a
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB ba6eb46e93a8f6eeec3d1c549bca52fb
statistics/