Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/791b5cfd80ebeb6dc07076b61147b1671bc34e78content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 791b5cfd80ebeb6dc07076b61147b1671bc34e78
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TACGGTTAGTTGTCAA-2326_E01, TATCACGCATCGCTTT-2326_E01, GGGATTAAGCACGTTG-2326_E01, ATGTCATCAAACATAG-2326_E01, ATGAAGTAGTCAGTAC-2326_E01 (top 5 of 5614 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
791b5cfd80ebeb6dc07076b61147b1671bc34e78.gz 2.41 GB b5f9e8c770287e7cf276ec7408182c94
791b5cfd80ebeb6dc07076b61147b1671bc34e78.gz.tbi 1.2 MB 3594cc0a56e8f3c70c420798e0aff9e7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB b4f0ffe05c90d858067ab8199f89695b
statistics/