Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/79329691ec96e140d840a999e3f35f883ca639ebcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 79329691ec96e140d840a999e3f35f883ca639eb
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CATCGCTTCTGTTCAT-2295_E02, GGGTCACTCCTCGATC-2295_E02, GGTCAGGAGGAGTCTT-2295_E02, TGAGTGAAGAACCTAC-2295_E02, TGCTCTCAGAGGAAGG-2295_E02 (top 5 of 2774 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
79329691ec96e140d840a999e3f35f883ca639eb.gz 1.46 GB 628ab2572b85c3f125405ffcb8b031ad
79329691ec96e140d840a999e3f35f883ca639eb.gz.tbi 925.11 KB cc066c0bffe92f255e019bc1b1d44513
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB fc44ba8ba9e980cb23aaea73eb5b0265
statistics/