Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/79ab0bf3d09490717aea2dd74fe07882ae2569e3content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 79ab0bf3d09490717aea2dd74fe07882ae2569e3
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell CTATTACTCCCGTTAC-2468_D02, TATCACGCAATTAAGG-2468_D02, AGGATTGAGTTGTCCC-2468_D02, GTAAGCAAGCGCAATT-2468_D02, CTTACCTCATTGGGAG-2468_D02 (top 5 of 4109 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
79ab0bf3d09490717aea2dd74fe07882ae2569e3.gz 2.26 GB 0fa7cfb9697f4dfbd2e9f7a183f5a8a9
79ab0bf3d09490717aea2dd74fe07882ae2569e3.gz.tbi 1.11 MB e1518dff5975c843095dc83bd7ddc044
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 3132705eba12eb30ccd4aa94c266b12d
statistics/