Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/7b12ba398484e050a1c0b6d40b3c86655eb5bd09content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7b12ba398484e050a1c0b6d40b3c86655eb5bd09
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACCAAGCGTCACCTAT-960_B03, CCTTGTTCACCTGCTC-960_B03, CTGTATTTCAACAAGG-960_B03, TTGAGCTAGTAAGAAC-960_B03, TGTGCGGGTAAACAAG-960_B03 (top 5 of 3038 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7b12ba398484e050a1c0b6d40b3c86655eb5bd09.gz 892.15 MB 8936cf5cb751187bcc143e237ad30e62
7b12ba398484e050a1c0b6d40b3c86655eb5bd09.gz.tbi 739.62 KB 0c34efe64d56a08225356c11cb1a73e7
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 015c0add0faa98a497ca73271bf9051e
statistics/