Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/7ebfffcb0886bc89d325810aeaab4f40231f4301content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 7ebfffcb0886bc89d325810aeaab4f40231f4301
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGTTACTTCGATATTG-2453_F02, CGTGTGTCACGTTACA-2453_F02, CGATTATCAATCATGT-2453_F02, ATGGCTAGTCACAGCG-2453_F02, AGTTTGATCGTTTCGC-2453_F02 (top 5 of 4954 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
7ebfffcb0886bc89d325810aeaab4f40231f4301.gz 2.0 GB e6a2384cbe77b93830afc9eda589f99d
7ebfffcb0886bc89d325810aeaab4f40231f4301.gz.tbi 1.05 MB ddae8c77c41e103d2f11522a96cfb21d
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 23582d7b8b339cca28c09fdf0f9c3528
statistics/