Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/85db906956c7b642c2f8ba26899fdfe4e9f0a952content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 85db906956c7b642c2f8ba26899fdfe4e9f0a952
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TGATCAGGTGAAACAA-2349_A08, GATTCATCAGGTATTT-2349_A08, ACACTAATCCCTCAGT-2349_A08, GATGGCTGTCACAGCG-2349_A08, GTGAGCGAGCGGCTGT-2349_A08 (top 5 of 1864 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
85db906956c7b642c2f8ba26899fdfe4e9f0a952.gz 917.61 MB 7a684f4054c6bac105a50446085d20d3
85db906956c7b642c2f8ba26899fdfe4e9f0a952.gz.tbi 761.86 KB 722a10013ad793a3750788fd8ed05882
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB bcca854e5a4509b3d4abda69cc7f4874
statistics/