Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/8a28f4cbd0e8c6cc277e50c50b0996804c030824content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8a28f4cbd0e8c6cc277e50c50b0996804c030824
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell ACAGGATCAGCACCAT-994_C03, ACGAGTAAGCCACAAT-994_C03, GCAGGATAGTTATTCC-994_C03, AACTGTTCAACTAGAA-994_C03, GTACACCCAGCAAGGC-994_C03 (top 5 of 3837 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8a28f4cbd0e8c6cc277e50c50b0996804c030824.gz 724.51 MB f3d11b2521f1d81f9826c5edcc121c44
8a28f4cbd0e8c6cc277e50c50b0996804c030824.gz.tbi 692.22 KB 11840be0a3113e3b54eb88a451a1c235
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 02dba1cbd1a4b85c003fe5ccd5b34e60
statistics/