Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/8a4bf81821a0f425be8ba9c15dfad6b509020312content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8a4bf81821a0f425be8ba9c15dfad6b509020312
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TACAGCTAGTGAGCAA-2362_A05, AAACCGGCACTCGCTC-2362_A05, CGTGTGTCATAGACTT-2362_A05, GACCTGCAGATTGAGG-2362_A05, GTAAGCAAGCTCGCTT-2362_A05 (top 5 of 4744 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8a4bf81821a0f425be8ba9c15dfad6b509020312.gz 1.71 GB 1fcaefabd0923efea22aa36789aae4b6
8a4bf81821a0f425be8ba9c15dfad6b509020312.gz.tbi 983.95 KB 796d34bcb8e6fa1874ea20e1633fd805
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 252a55b568bc407ce8cf4e19bd80dfb7
statistics/