Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/8b4e238e60991e024a04d38292e487c475cb6cefcontent_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8b4e238e60991e024a04d38292e487c475cb6cef
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell TTTGCGGAGTAGGATG-2278_B05, GTTTATCTCTACTAAG-2278_B05, TTTGGTGCATTGACAT-2278_B05, CCACAATAGGTGCTGC-2278_B05, TATGACTCAGGCAAGC-2278_B05 (top 5 of 5116 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8b4e238e60991e024a04d38292e487c475cb6cef.gz 1.98 GB 55da0dc0fe24da288b482b1840a516de
8b4e238e60991e024a04d38292e487c475cb6cef.gz.tbi 1.06 MB 0ee59e2c27c9f438b976075e513a6958
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 4d99d2370a8bf185590b34f8b6256743
statistics/