Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/8bc0fe2c2b0855b066615c918417060adb6fe5e1content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8bc0fe2c2b0855b066615c918417060adb6fe5e1
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell GGGTGTTGTAATGGCC-2540_B02, AGGTCAAAGCTAAAGG-2540_B02, GGTGAGCCAGCAGGTA-2540_B02, AGTAACCTCGTTTCGC-2540_B02, CTACTAAAGCCGCTAA-2540_B02 (top 5 of 3981 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8bc0fe2c2b0855b066615c918417060adb6fe5e1.gz 2.25 GB a3682d87c1df80aa81edfc0a33bdb7ac
8bc0fe2c2b0855b066615c918417060adb6fe5e1.gz.tbi 1.13 MB 8cd2a4881565504e08ad870c8c6d2709
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB 2f8a39984f535e59edbd71af2ea73355
statistics/