Resource

Id summary/johansen2025Crossspecies/atac_fragments/human/8c3d4596be432e469850d9c58cc8826666399652content_copy
Type fragment_score
Version 0
Summary
Description
Labels
  • assay: 10x_Multiome
  • brain_region: basal ganglia
  • data_types: fragments
  • dataset: johansen2025Crossspecies
  • library: 8c3d4596be432e469850d9c58cc8826666399652
  • modalities: ATAC
  • processing_level: aligned
  • reference_genome: reference/Human/genome/ucsc-hg38
  • resolution: single_nucleus
  • sequencing_platform: Illumina
  • species: human
  • vendor: 10x_Genomics

Scores (2)

ID Type Default annotation Description Histogram Range
cell str

cell
HISTOGRAM FOR cell AATCAGGAGGAGCACG-2271_A08, ATTCATGAGCGCCTAA-2271_A08, CTAACCACAAGGTAAC-2271_A08, AAAGGAGCACTTCATC-2271_A08, CGGGTATGTTACCTGT-2271_A08 (top 5 of 3514 values)
count int

count
HISTOGRAM FOR count [1, 1]

Fragments

not computed

Files

Filename Size md5
8c3d4596be432e469850d9c58cc8826666399652.gz 2.36 GB 4b5dfb1f90378767948071eb14b01796
8c3d4596be432e469850d9c58cc8826666399652.gz.tbi 1.15 MB f984be05ef61a92a3f224ac45b30127b
fragment_count_dist_plot.py 853.0 B 9d735ee8c687286d50484e7f1e398e60
genomic_resource.yaml 1.39 KB e54aa6269304f08ea862efeca9feeab0
statistics/